Auditory Relacs Plugins  0.9.8
Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
AdaptedFICurves Class Reference

#include <adaptedficurves.h>

Inheritance diagram for AdaptedFICurves:
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Collaboration diagram for AdaptedFICurves:
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Public Member Functions

 AdaptedFICurves (void)
 
virtual int main (void)
 
- Public Member Functions inherited from ConfigDialog
 ConfigDialog (const string &configident="", int configgroup=0, const string &name="", const string &author="", const string &version="", const string &date=__DATE__)
 
virtual ~ConfigDialog (void)
 
string name (void) const
 
virtual void setName (const string &name)
 
string author (void) const
 
virtual void setAuthor (const string &author)
 
string version (void) const
 
virtual void setVersion (const string &version)
 
string date (void) const
 
virtual void setDate (const string &date)
 
virtual OptWidget * dialogOptions (OptDialog *od, string *tabhotkeys=0)
 
virtual void dialogButtons (OptDialog *od)
 
virtual void dialogEmptyMessage (OptDialog *od)
 
int dialogSelectMask (void) const
 
void setDialogSelectMask (int mask)
 
void addDialogSelectMask (int mask)
 
int dialogReadOnlyMask (void) const
 
void setDialogReadOnlyMask (int mask)
 
void addDialogReadOnlyMask (int mask)
 
int dialogStyle (void) const
 
void setDialogStyle (int style)
 
void addDialogStyle (int style)
 
string dialogCaption (void) const
 
void setDialogCaption (const string &caption)
 
bool dialogHeader (void) const
 
void setDialogHeader (bool d)
 
string headerBackgroundColor (void) const
 
void setHeaderBackgroundColor (const string &color)
 
string headerForegroundColor (void) const
 
void setHeaderForegroundColor (const string &color)
 
string headerImageFile (void) const
 
void setHeaderImageFile (const string &file)
 
virtual void dialogHeaderWidget (OptDialog *od)
 
bool dialogHelp (void) const
 
void setDialogHelp (bool d)
 
string helpCaption (void) const
 
void setHelpCaption (const string &caption)
 
string helpPath (int inx=0) const
 
int helpPathes (void) const
 
void clearHelpPathes (void)
 
void setHelpPath (const string &path)
 
void addHelpPath (const string &path)
 
virtual string helpFileName (void) const
 
bool dialogOpen (void) const
 
bool helpOpen (void) const
 
QWidget * mainWidget (void)
 
virtual void setMainWidget (QWidget *widget)
 
void lock () const
 
void unlock () const
 
bool tryLock (int timeout=1)
 
QMutex * mutex (void)
 
- Public Member Functions inherited from ConfigClass
 ConfigClass (const string &ident, int group=0, int mode=0xffff, int selectmask=0)
 
 ConfigClass (const ConfigClass &C)
 
virtual ~ConfigClass (void)
 
const string & configIdent (void) const
 
void setConfigIdent (const string &ident)
 
int configGroup (void) const
 
void setConfigGroup (int group)
 
int configMode (void) const
 
void setConfigMode (int mode)
 
void addConfigMode (int mode)
 
void delConfigMode (int mode)
 
int configSelectMask (void) const
 
void setConfigSelectMask (int mask)
 
void addConfig (void)
 
void readConfig (void)
 
virtual void readConfig (StrQueue &sq)
 
virtual void saveConfig (ofstream &str)
 
virtual int configSize (void) const
 
virtual void config (void)
 
virtual void preConfig (void)
 
- Public Member Functions inherited from StandardTraces
 StandardTraces (void)
 

Protected Member Functions

void analyze (EventList &spikes, SampleDataD &rate, double delay, double duration, double pause, int count, double sstime, double onsettime, const MapD &times, MapD &onsetrates, MapD &onsetratessd, MapD &ssrates, MapD &ssratessd, MapD &spikecount)
 
void plot (const EventList &spikes, const SampleDataD &rate, const SampleDataD &am, const MapD &onsetrates, const MapD &ssrates, double adaptint, const MapD &spikecount)
 
void saveSpikes (const Options &header, const EventList &spikes)
 
void saveRate (const Options &header, const SampleDataD &rate)
 
void saveData (const Options &header, const MapD &times, const MapD &onsetrates, const MapD &onsetratessd, const MapD &ssrates, const MapD &ssratessd)
 
- Protected Member Functions inherited from ConfigDialog
void setDialogOpen (bool open=true)
 
void setHelpOpen (bool open=true)
 

Protected Attributes

MultiPlot P
 
- Protected Attributes inherited from ConfigDialog
Options DialogOptions
 

Additional Inherited Members

- Public Types inherited from ConfigClass
enum  Action
 
- Public Slots inherited from ConfigDialog
virtual void dialog (void)
 
virtual void help (void)
 
virtual void notifyDialog (const Options &opt)
 
- Signals inherited from ConfigDialog
void dialogAccepted (void)
 
void dialogAction (int r)
 
void dialogClosed (int r)
 
- Static Public Member Functions inherited from ConfigClass
static void setConfigureClasses (ConfigureClasses *cfg)
 
- Protected Slots inherited from ConfigDialog
void notificationFromDialog (const Parameter &p)
 
virtual void dClosed (int r)
 
virtual void hClosed (int r)
 
- Static Protected Member Functions inherited from StandardTraces
static void clearIndices (int *traceindices, int n=-1)
 
static void initStandardTraces (const InList &data, int *ntraces, int *traceindices, const string *names, string &namelist, bool alpha=false)
 
static void initStandardEventTraces (const InList &data, const EventList &events, int *ntraces, int *traceindices, int *eventindices, const string *tracenames, const string *eventnames, string &tracenamelist, string &eventnamelist, bool alpha=false)
 
static void initStandardOutputs (const RELACSPlugin *rp, int *ntraces, int *traceindices, const string *names, string &namelist, bool alpha=false)
 
- Static Protected Attributes inherited from StandardTraces
static const int MaxTraces
 

Detailed Description

[RePro] First adapts the neuron to a background sound intensity and then measures f-I curves.

Author
Jan Benda
Version
1.0 (Jan 27, 2011)
Screenshot
adaptedficurves.png
Options
  • Stimulus
  • Adaptation stimulus
  • adaptbase=SPL: Intensity of adapting stimulus relative to (string)
  • adaptint=50dB SPL: Sound intensity of adapting stimulus (number)
  • adaptinit=1000ms: Duration of initial adaptation stimulus (number)
  • adaptduration=100ms: Duration of subsequent adaptation stimuli (number)
  • Test stimuli
  • intbase=SPL: Intensities of test stimulus relative to (string)
  • intmin=50dB: Minimum sound intensity of test stimulus (number)
  • intmax=100dB: Maximum sound intensity of test stimulus (number)
  • intstep=10dB SPL: Sound-intensity steps of test stimulus (number)
  • duration=100ms: Duration of test stimuli (number)
  • General
  • side=left: Speaker (string)
  • carrierfreq=0kHz: Frequency of carrier (number)
  • usebestfreq=true: Relative to the cell's best frequency (boolean)
  • ramp=1ms: Duration of ramps for all intenisty transitions (number)
  • pause=1000ms: Pause between stimuli (number)
  • delay=100ms: Part of pause before stimulus (number)
  • repetitions=10: Number of repetitions of the stimulus (integer)
  • Analysis
  • onsettime=100ms: Onset rate occurs within (number)
  • sstime=100ms: Width for measuring steady-states (number)

Constructor & Destructor Documentation

AdaptedFICurves ( void  )

References AdaptedFICurves::P.

Member Function Documentation

int main ( void  )
virtual

Implements RePro.

References RangeLoop::alternateInDown(), AdaptedFICurves::analyze(), OutData::back(), MultiPlot::clear(), OutData::clear(), Map< T >::clear(), OutData::decibel(), MultiPlot::draw(), DaqError::error(), DaqError::errorText(), OutData::fill(), OutData::front(), OutData::indices(), OutData::length(), MultiPlot::lock(), RangeLoop::loop(), AdaptedFICurves::P, AdaptedFICurves::plot(), Map< T >::push(), OutData::push(), RangeLoop::reset(), MultiPlot::resize(), AdaptedFICurves::saveData(), AdaptedFICurves::saveRate(), AdaptedFICurves::saveSpikes(), MultiPlot::setCommonXRange(), OutData::setDelay(), OutData::setIntensity(), OutData::setSampleInterval(), OutData::setTrace(), and MultiPlot::unlock().

void analyze ( EventList &  spikes,
SampleDataD &  rate,
double  delay,
double  duration,
double  pause,
int  count,
double  sstime,
double  onsettime,
const MapD &  times,
MapD &  onsetrates,
MapD &  onsetratessd,
MapD &  ssrates,
MapD &  ssratessd,
MapD &  spikecount 
)
protected

References EventList::back(), Map< T >::clear(), EventData::count(), EventList::frequency(), SampleData< T >::index(), SampleData< T >::mean(), Map< T >::push(), EventList::push(), Map< T >::size(), Map< T >::sortByX(), and Map< T >::x().

Referenced by AdaptedFICurves::main().

void plot ( const EventList &  spikes,
const SampleDataD &  rate,
const SampleDataD &  am,
const MapD &  onsetrates,
const MapD &  ssrates,
double  adaptint,
const MapD &  spikecount 
)
protected

References MultiPlot::clear(), MultiPlot::draw(), MultiPlot::lock(), AdaptedFICurves::P, EventList::size(), and MultiPlot::unlock().

Referenced by AdaptedFICurves::main().

void saveSpikes ( const Options &  header,
const EventList &  spikes 
)
protected

References TableKey::addNumber(), TableKey::saveKey(), and EventList::saveText().

Referenced by AdaptedFICurves::main().

void saveRate ( const Options &  header,
const SampleDataD &  rate 
)
protected

References TableKey::addNumber(), SampleData< T >::pos(), TableKey::save(), TableKey::saveKey(), and SampleData< T >::size().

Referenced by AdaptedFICurves::main().

void saveData ( const Options &  header,
const MapD &  times,
const MapD &  onsetrates,
const MapD &  onsetratessd,
const MapD &  ssrates,
const MapD &  ssratessd 
)
protected

References TableKey::addNumber(), TableKey::save(), TableKey::saveKey(), Map< T >::size(), and Map< T >::x().

Referenced by AdaptedFICurves::main().

Member Data Documentation

MultiPlot P
protected

Referenced by AdaptedFICurves::AdaptedFICurves(), AdaptedFICurves::main(), and AdaptedFICurves::plot().

The documentation for this class was generated from the following files:
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