Basic Electrophysiology Relacs Plugins
0.9.8
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#include <spikingneuron.h>
Public Member Functions | |
RushRinzel (void) | |
virtual string | name (void) const |
virtual int | dimension (void) const |
virtual void | variables (vector< string > &varnames) const |
virtual void | units (vector< string > &u) const |
virtual void | operator() (double t, double s, double *x, double *dxdt, int n) |
virtual void | init (double *x) const |
virtual void | add (void) |
virtual void | notify (void) |
Public Member Functions inherited from Connor | |
Connor (void) | |
virtual void | conductances (vector< string > &conductancenames) const |
virtual void | conductances (double *g) const |
virtual void | currents (vector< string > ¤tnames) const |
virtual void | currents (double *c) const |
Public Member Functions inherited from HodgkinHuxley | |
HodgkinHuxley (void) | |
Public Member Functions inherited from SpikingNeuron | |
SpikingNeuron (void) | |
virtual | ~SpikingNeuron (void) |
virtual string | conductanceUnit (void) const |
virtual string | currentUnit (void) const |
virtual string | inputUnit (void) const |
double | gain (void) const |
double | offset (void) const |
Public Member Functions inherited from ConfigClass | |
ConfigClass (const string &ident, int group=0, int mode=0xffff, int selectmask=0) | |
ConfigClass (const ConfigClass &C) | |
virtual | ~ConfigClass (void) |
const string & | configIdent (void) const |
void | setConfigIdent (const string &ident) |
int | configGroup (void) const |
void | setConfigGroup (int group) |
int | configMode (void) const |
void | setConfigMode (int mode) |
void | addConfigMode (int mode) |
void | delConfigMode (int mode) |
int | configSelectMask (void) const |
void | setConfigSelectMask (int mask) |
void | addConfig (void) |
void | readConfig (void) |
virtual void | readConfig (StrQueue &sq) |
virtual void | saveConfig (ofstream &str) |
virtual int | configSize (void) const |
virtual void | config (void) |
virtual void | preConfig (void) |
Protected Attributes | |
double | AV0 |
double | ADV |
double | BV0 |
double | BDV |
double | BTau |
Protected Attributes inherited from Connor | |
double | EKA |
double | GKA |
double | GKAGates |
double | IKA |
Protected Attributes inherited from HodgkinHuxley | |
double | C |
double | PT |
double | ENa |
double | EK |
double | EL |
double | GNa |
double | GK |
double | GL |
double | GNaGates |
double | GKGates |
double | INa |
double | IK |
double | IL |
Protected Attributes inherited from SpikingNeuron | |
double | Gain |
double | Offset |
Additional Inherited Members | |
Public Types inherited from ConfigClass | |
enum | Action |
Static Public Member Functions inherited from ConfigClass | |
static void | setConfigureClasses (ConfigureClasses *cfg) |
Static Public Attributes inherited from SpikingNeuron | |
static const int | ScalingFlag = 16 |
static const int | ModelFlag = 32 |
static const int | DescriptionFlag = 64 |
[ModelLib] The Rush-Rinzel model with A current
This is the implementation of the Rush-Rinzel model (Maureen E. Rush and John Rinzel (1995): The potassium A-current, low firing rates and rebound excitation in Hodgkin-Huxley models. Bulletin of Mathematical Biology 57(6), pp. 899-929), a modified Hodgkin-Huxley model with an additional A current.
RushRinzel | ( | void | ) |
References RushRinzel::ADV, RushRinzel::AV0, RushRinzel::BDV, RushRinzel::BTau, RushRinzel::BV0, HodgkinHuxley::C, HodgkinHuxley::EK, Connor::EKA, HodgkinHuxley::EL, HodgkinHuxley::ENa, HodgkinHuxley::GK, Connor::GKA, Connor::GKAGates, HodgkinHuxley::GKGates, HodgkinHuxley::GL, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, HodgkinHuxley::IK, Connor::IKA, HodgkinHuxley::IL, HodgkinHuxley::INa, and HodgkinHuxley::PT.
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Reimplemented from Connor.
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Reimplemented from Connor.
Referenced by RushRinzel::units(), and RushRinzel::variables().
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[out] | varnames | the names of each of the dimension() variables. Gating variables (ranging between 0 and 1) should be a single lower-case character, potentials and equivalent potentials a single upper-case character, and concentrations should be in brackets (e.g. [Ca]). |
Reimplemented from Connor.
References RushRinzel::dimension().
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[out] | u | the units of the variables returned by variables(). |
Reimplemented from Connor.
References RushRinzel::dimension().
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Computes the derivative dxdt at time t with stimulus s given the state x.
Reimplemented from Connor.
References RushRinzel::ADV, RushRinzel::AV0, RushRinzel::BDV, RushRinzel::BTau, RushRinzel::BV0, HodgkinHuxley::C, HodgkinHuxley::EK, Connor::EKA, HodgkinHuxley::EL, HodgkinHuxley::ENa, relacs::exp(), HodgkinHuxley::GK, Connor::GKA, Connor::GKAGates, HodgkinHuxley::GKGates, HodgkinHuxley::GL, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, HodgkinHuxley::IK, Connor::IKA, HodgkinHuxley::IL, HodgkinHuxley::INa, and HodgkinHuxley::PT.
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Initialize the state x with usefull inital conditions.
Reimplemented from Connor.
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Add parameters as options.
Reimplemented from Connor.
References Connor::add(), RushRinzel::ADV, RushRinzel::AV0, RushRinzel::BDV, RushRinzel::BTau, RushRinzel::BV0, and SpikingNeuron::ModelFlag.
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Read out the current values from the list of Options.
Reimplemented from Connor.
References RushRinzel::ADV, RushRinzel::AV0, RushRinzel::BDV, RushRinzel::BTau, RushRinzel::BV0, SpikingNeuron::notify(), and Connor::notify().
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Referenced by RushRinzel::add(), RushRinzel::notify(), RushRinzel::operator()(), and RushRinzel::RushRinzel().
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Referenced by RushRinzel::add(), RushRinzel::notify(), RushRinzel::operator()(), and RushRinzel::RushRinzel().
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Referenced by RushRinzel::add(), RushRinzel::notify(), RushRinzel::operator()(), and RushRinzel::RushRinzel().
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Referenced by RushRinzel::add(), RushRinzel::notify(), RushRinzel::operator()(), and RushRinzel::RushRinzel().
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Referenced by RushRinzel::add(), RushRinzel::notify(), RushRinzel::operator()(), and RushRinzel::RushRinzel().