Basic Electrophysiology Relacs Plugins
0.9.8
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#include <spikingneuron.h>
Public Member Functions | |
WangIKNa (void) | |
virtual string | name (void) const |
virtual int | dimension (void) const |
virtual void | variables (vector< string > &varnames) const |
virtual void | units (vector< string > &u) const |
virtual void | operator() (double t, double s, double *x, double *dxdt, int n) |
virtual void | init (double *x) const |
virtual void | conductances (vector< string > &conductancenames) const |
virtual void | conductances (double *g) const |
virtual void | currents (vector< string > ¤tnames) const |
virtual void | currents (double *c) const |
virtual void | add (void) |
virtual void | notify (void) |
Public Member Functions inherited from HodgkinHuxley | |
HodgkinHuxley (void) | |
Public Member Functions inherited from SpikingNeuron | |
SpikingNeuron (void) | |
virtual | ~SpikingNeuron (void) |
virtual string | conductanceUnit (void) const |
virtual string | currentUnit (void) const |
virtual string | inputUnit (void) const |
double | gain (void) const |
double | offset (void) const |
Public Member Functions inherited from ConfigClass | |
ConfigClass (const string &ident, int group=0, int mode=0xffff, int selectmask=0) | |
ConfigClass (const ConfigClass &C) | |
virtual | ~ConfigClass (void) |
const string & | configIdent (void) const |
void | setConfigIdent (const string &ident) |
int | configGroup (void) const |
void | setConfigGroup (int group) |
int | configMode (void) const |
void | setConfigMode (int mode) |
void | addConfigMode (int mode) |
void | delConfigMode (int mode) |
int | configSelectMask (void) const |
void | setConfigSelectMask (int mask) |
void | addConfig (void) |
void | readConfig (void) |
virtual void | readConfig (StrQueue &sq) |
virtual void | saveConfig (ofstream &str) |
virtual int | configSize (void) const |
virtual void | config (void) |
virtual void | preConfig (void) |
Protected Attributes | |
double | ECa |
double | GCaS |
double | GKCaS |
double | GKNa |
double | GDS |
double | GLD |
double | GCaD |
double | GKCaD |
double | GCaSGates |
double | GKCaSGates |
double | GKNaGates |
double | GDSGates |
double | GCaDGates |
double | GKCaDGates |
double | GSDGates |
double | ICaS |
double | IKCaS |
double | IKNa |
double | IDS |
double | ILD |
double | ICaD |
double | IKCaD |
double | ISD |
double | CaSA |
double | CaSTau |
double | CaDA |
double | CaDTau |
Protected Attributes inherited from HodgkinHuxley | |
double | C |
double | PT |
double | ENa |
double | EK |
double | EL |
double | GNa |
double | GK |
double | GL |
double | GNaGates |
double | GKGates |
double | INa |
double | IK |
double | IL |
Protected Attributes inherited from SpikingNeuron | |
double | Gain |
double | Offset |
Additional Inherited Members | |
Public Types inherited from ConfigClass | |
enum | Action |
Static Public Member Functions inherited from ConfigClass | |
static void | setConfigureClasses (ConfigureClasses *cfg) |
Static Public Attributes inherited from SpikingNeuron | |
static const int | ScalingFlag = 16 |
static const int | ModelFlag = 32 |
static const int | DescriptionFlag = 64 |
[ModelLib] The Wang et al. 2003 model with a sodium activated potassium current.
(X. J. Wang and Y. Liu and M.V. Sanchez-Vives and D.A. McCormick (2003): Adaptation and temporal decorrelation by single neurons in the primary visual cortex. J. Neurophysiol. 89, pp. 3279-3293)
WangIKNa | ( | void | ) |
References HodgkinHuxley::C, WangIKNa::CaDA, WangIKNa::CaDTau, WangIKNa::CaSA, WangIKNa::CaSTau, WangIKNa::ECa, HodgkinHuxley::EK, HodgkinHuxley::EL, HodgkinHuxley::ENa, WangIKNa::GCaD, WangIKNa::GCaDGates, WangIKNa::GCaS, WangIKNa::GCaSGates, WangIKNa::GDS, WangIKNa::GDSGates, HodgkinHuxley::GK, WangIKNa::GKCaD, WangIKNa::GKCaDGates, WangIKNa::GKCaS, WangIKNa::GKCaSGates, HodgkinHuxley::GKGates, WangIKNa::GKNa, WangIKNa::GKNaGates, HodgkinHuxley::GL, WangIKNa::GLD, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, WangIKNa::GSDGates, WangIKNa::ICaD, WangIKNa::ICaS, WangIKNa::IDS, HodgkinHuxley::IK, WangIKNa::IKCaD, WangIKNa::IKCaS, WangIKNa::IKNa, HodgkinHuxley::IL, WangIKNa::ILD, HodgkinHuxley::INa, WangIKNa::ISD, and HodgkinHuxley::PT.
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Reimplemented from HodgkinHuxley.
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Reimplemented from HodgkinHuxley.
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[out] | varnames | the names of each of the dimension() variables. Gating variables (ranging between 0 and 1) should be a single lower-case character, potentials and equivalent potentials a single upper-case character, and concentrations should be in brackets (e.g. [Ca]). |
Reimplemented from HodgkinHuxley.
References HodgkinHuxley::variables().
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[out] | u | the units of the variables returned by variables(). |
Reimplemented from HodgkinHuxley.
References HodgkinHuxley::units().
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Computes the derivative dxdt at time t with stimulus s given the state x.
Reimplemented from HodgkinHuxley.
References HodgkinHuxley::C, WangIKNa::CaDA, WangIKNa::CaDTau, WangIKNa::CaSA, WangIKNa::CaSTau, WangIKNa::ECa, HodgkinHuxley::EK, HodgkinHuxley::EL, HodgkinHuxley::ENa, relacs::exp(), WangIKNa::GCaD, WangIKNa::GCaDGates, WangIKNa::GCaS, WangIKNa::GCaSGates, WangIKNa::GDS, WangIKNa::GDSGates, HodgkinHuxley::GK, WangIKNa::GKCaD, WangIKNa::GKCaDGates, WangIKNa::GKCaS, WangIKNa::GKCaSGates, HodgkinHuxley::GKGates, WangIKNa::GKNa, WangIKNa::GKNaGates, HodgkinHuxley::GL, WangIKNa::GLD, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, WangIKNa::GSDGates, WangIKNa::ICaD, WangIKNa::ICaS, WangIKNa::IDS, HodgkinHuxley::IK, WangIKNa::IKCaD, WangIKNa::IKCaS, WangIKNa::IKNa, HodgkinHuxley::IL, WangIKNa::ILD, HodgkinHuxley::INa, WangIKNa::ISD, relacs::pow(), and HodgkinHuxley::PT.
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Initialize the state x with usefull inital conditions.
Reimplemented from HodgkinHuxley.
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Returns in conductancenames the names of the individual ionic conductances that conductances(double*) const would return.
Reimplemented from HodgkinHuxley.
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Returns in g the values of the individual ionic conductances. The number of conductances is defined by the size of conductancenames the function conductances(vector<string>&) const returns.
Reimplemented from HodgkinHuxley.
References WangIKNa::GCaDGates, WangIKNa::GCaSGates, WangIKNa::GDSGates, WangIKNa::GKCaDGates, WangIKNa::GKCaSGates, HodgkinHuxley::GKGates, WangIKNa::GKNaGates, HodgkinHuxley::GL, WangIKNa::GLD, HodgkinHuxley::GNaGates, and WangIKNa::GSDGates.
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Returns in currentnames the names of the individual ionic currents that currents(double*) const would return.
Reimplemented from HodgkinHuxley.
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Returns in c the values of the individual ionic currents. The number of currents is defined by the size of currentnames the function currents(vector<string>&) const returns.
Reimplemented from HodgkinHuxley.
References WangIKNa::ICaD, WangIKNa::ICaS, WangIKNa::IDS, HodgkinHuxley::IK, WangIKNa::IKCaD, WangIKNa::IKCaS, WangIKNa::IKNa, HodgkinHuxley::IL, WangIKNa::ILD, HodgkinHuxley::INa, and WangIKNa::ISD.
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Add parameters as options.
Reimplemented from HodgkinHuxley.
References SpikingNeuron::add(), HodgkinHuxley::C, WangIKNa::CaDA, WangIKNa::CaDTau, WangIKNa::CaSA, WangIKNa::CaSTau, SpikingNeuron::conductanceUnit(), WangIKNa::ECa, HodgkinHuxley::EK, HodgkinHuxley::EL, HodgkinHuxley::ENa, WangIKNa::GCaD, WangIKNa::GCaS, WangIKNa::GDS, HodgkinHuxley::GK, WangIKNa::GKCaD, WangIKNa::GKCaS, WangIKNa::GKNa, HodgkinHuxley::GL, WangIKNa::GLD, HodgkinHuxley::GNa, SpikingNeuron::ModelFlag, and HodgkinHuxley::PT.
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Read out the current values from the list of Options.
Reimplemented from HodgkinHuxley.
References WangIKNa::CaDA, WangIKNa::CaDTau, WangIKNa::CaSA, WangIKNa::CaSTau, WangIKNa::ECa, WangIKNa::GCaD, WangIKNa::GCaS, WangIKNa::GDS, WangIKNa::GKCaD, WangIKNa::GKCaS, WangIKNa::GKNa, WangIKNa::GLD, SpikingNeuron::notify(), and HodgkinHuxley::notify().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::conductances(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::conductances(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::currents(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().
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Referenced by WangIKNa::add(), WangIKNa::notify(), WangIKNa::operator()(), and WangIKNa::WangIKNa().