#include <spikingneuron.h>

Inheritance diagram for FitzhughNagumo:

Collaboration diagram for FitzhughNagumo:

Public Member Functions
	FitzhughNagumo (void)

virtual string	name (void) const

virtual int	dimension (void) const

virtual void	variables (vector< string > &varnames) const

virtual void	units (vector< string > &u) const

virtual void	operator() (double t, double s, double x, double dxdt, int n)

virtual void	init (double *x) const

virtual void	add (void)

virtual void	notify (void)

Public Member Functions inherited from SpikingNeuron
	SpikingNeuron (void)

virtual	~SpikingNeuron (void)

virtual void	conductances (vector< string > &conductancenames) const

virtual void	conductances (double *g) const

virtual string	conductanceUnit (void) const

virtual void	currents (vector< string > &currentnames) const

virtual void	currents (double *c) const

virtual string	currentUnit (void) const

virtual string	inputUnit (void) const

double	gain (void) const

double	offset (void) const

Public Member Functions inherited from ConfigClass
	ConfigClass (const string &ident, int group=0, int mode=0xffff, int selectmask=0)

	ConfigClass (const ConfigClass &C)

virtual	~ConfigClass (void)

const string &	configIdent (void) const

void	setConfigIdent (const string &ident)

int	configGroup (void) const

void	setConfigGroup (int group)

int	configMode (void) const

void	setConfigMode (int mode)

void	addConfigMode (int mode)

void	delConfigMode (int mode)

int	configSelectMask (void) const

void	setConfigSelectMask (int mask)

void	addConfig (void)

void	readConfig (void)

virtual void	readConfig (StrQueue &sq)

virtual void	saveConfig (ofstream &str)

virtual int	configSize (void) const

virtual void	config (void)

virtual void	preConfig (void)

Protected Attributes
double	Phi

double	A

double	B

double	TimeScale

Protected Attributes inherited from SpikingNeuron
double	Gain

double	Offset

Additional Inherited Members
Public Types inherited from ConfigClass
enum	Action

Static Public Member Functions inherited from ConfigClass
static void	setConfigureClasses (ConfigureClasses *cfg)

Static Public Attributes inherited from SpikingNeuron
static const int	ScalingFlag = 16

static const int	ModelFlag = 32

static const int	DescriptionFlag = 64

Detailed Description

[ModelLib] The Fitzhugh-Nagumo model

Author: Jan Benda

Todo:: verify reference, parameter values, and units

From Koch, Biophysics of Computation, Chap.7.1

Constructor & Destructor Documentation

FitzhughNagumo ( void )

References FitzhughNagumo::A, FitzhughNagumo::B, FitzhughNagumo::Phi, and FitzhughNagumo::TimeScale.

Member Function Documentation

string name ( void ) const

virtual

Returns: the name of the model.

Reimplemented from SpikingNeuron.

int dimension ( void ) const

virtual

Returns: the dimension of the system.

See Also: variables(), operator()()

Implements SpikingNeuron.

Referenced by FitzhughNagumo::units(), and FitzhughNagumo::variables().

void variables ( vector< string > & varnames ) const

virtual

Parameters

[out] varnames the names of each of the dimension() variables. Gating variables (ranging between 0 and 1) should be a single lower-case character, potentials and equivalent potentials a single upper-case character, and concentrations should be in brackets (e.g. [Ca]).