#include <spikingneuron.h>

Inheritance diagram for Chacron2007:

Collaboration diagram for Chacron2007:

Public Member Functions
	Chacron2007 (void)

virtual string	name (void) const

virtual int	dimension (void) const

virtual void	variables (vector< string > &varnames) const

virtual void	units (vector< string > &u) const

virtual string	conductanceUnit (void) const

virtual string	currentUnit (void) const

virtual string	inputUnit (void) const

virtual void	operator() (double t, double s, double x, double dxdt, int n)

virtual void	init (double *x) const

virtual void	add (void)

Public Member Functions inherited from HodgkinHuxley
	HodgkinHuxley (void)

virtual void	conductances (vector< string > &conductancenames) const

virtual void	conductances (double *g) const

virtual void	currents (vector< string > &currentnames) const

virtual void	currents (double *c) const

virtual void	notify (void)

Public Member Functions inherited from SpikingNeuron
	SpikingNeuron (void)

virtual	~SpikingNeuron (void)

double	gain (void) const

double	offset (void) const

Public Member Functions inherited from ConfigClass
	ConfigClass (const string &ident, int group=0, int mode=0xffff, int selectmask=0)

	ConfigClass (const ConfigClass &C)

virtual	~ConfigClass (void)

const string &	configIdent (void) const

void	setConfigIdent (const string &ident)

int	configGroup (void) const

void	setConfigGroup (int group)

int	configMode (void) const

void	setConfigMode (int mode)

void	addConfigMode (int mode)

void	delConfigMode (int mode)

int	configSelectMask (void) const

void	setConfigSelectMask (int mask)

void	addConfig (void)

void	readConfig (void)

virtual void	readConfig (StrQueue &sq)

virtual void	saveConfig (ofstream &str)

virtual int	configSize (void) const

virtual void	config (void)

virtual void	preConfig (void)

Additional Inherited Members
Public Types inherited from ConfigClass
enum	Action

Static Public Member Functions inherited from ConfigClass
static void	setConfigureClasses (ConfigureClasses *cfg)

Static Public Attributes inherited from SpikingNeuron
static const int	ScalingFlag = 16

static const int	ModelFlag = 32

static const int	DescriptionFlag = 64

Protected Attributes inherited from HodgkinHuxley
double	C

double	PT

double	ENa

double	EK

double	EL

double	GNa

double	GK

double	GL

double	GNaGates

double	GKGates

double	INa

double	IK

double	IL

Protected Attributes inherited from SpikingNeuron
double	Gain

double	Offset

Detailed Description

[ModelLib] A variant of the Hodgkin-Huxley model with dynamic position of sodium activation and inactivation.

Author: Jan Benda

This is a conductance based model where a dynamic threshold is explicitly implemented. This model generates divisive effects on the adapted f-I curves. (Maurice J. Chacron, Benjamin Lindner and André Longtin (2007): Threshold fatigue and information transfer. J. Comput. Neurosci. 23, pp. 301-311)

Constructor & Destructor Documentation

Chacron2007 ( void )

References HodgkinHuxley::C, HodgkinHuxley::EK, HodgkinHuxley::EL, HodgkinHuxley::ENa, HodgkinHuxley::GK, HodgkinHuxley::GKGates, HodgkinHuxley::GL, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, HodgkinHuxley::IK, HodgkinHuxley::IL, HodgkinHuxley::INa, and HodgkinHuxley::PT.

Member Function Documentation

string name ( void ) const

virtual

Returns: the name of the model.

Reimplemented from HodgkinHuxley.

int dimension ( void ) const

virtual

Returns: the dimension of the system.

See Also: variables(), operator()()

Reimplemented from HodgkinHuxley.

void variables ( vector< string > & varnames ) const

virtual

Parameters

[out] varnames the names of each of the dimension() variables. Gating variables (ranging between 0 and 1) should be a single lower-case character, potentials and equivalent potentials a single upper-case character, and concentrations should be in brackets (e.g. [Ca]).

See Also: dimension(), units(), operator()()

Reimplemented from HodgkinHuxley.

References HodgkinHuxley::variables().

void units ( vector< string > & u ) const

virtual

Parameters

[out] u the units of the variables returned by variables().

See Also: dimension(), operator()()

Reimplemented from HodgkinHuxley.

References HodgkinHuxley::units().

string conductanceUnit ( void ) const

virtual

Returns the unit of the conductances returned by conductances(double*) const. The default implementation returns mS/cm^2.

Reimplemented from SpikingNeuron.

string currentUnit ( void ) const

virtual

Returns the unit of the currents returned by currents(double*) const. The default implementation returns uA/cm^2.

Reimplemented from SpikingNeuron.

string inputUnit ( void ) const

virtual

Returns the unit of the input (the stimulus). The default implementation returns uA/cm^2.

See Also: operator()()

Reimplemented from SpikingNeuron.

void operator()	(	double	t,
		double	s,
		double *	x,
		double *	dxdt,
		int	n
	)

virtual

Computes the derivative dxdt at time t with stimulus s given the state x.

Reimplemented from HodgkinHuxley.

References HodgkinHuxley::C, HodgkinHuxley::EK, HodgkinHuxley::EL, HodgkinHuxley::ENa, relacs::exp(), HodgkinHuxley::GK, HodgkinHuxley::GKGates, HodgkinHuxley::GL, HodgkinHuxley::GNa, HodgkinHuxley::GNaGates, HodgkinHuxley::IK, HodgkinHuxley::IL, and HodgkinHuxley::INa.

void init ( double * x ) const

virtual

Initialize the state x with usefull inital conditions.

Reimplemented from HodgkinHuxley.

void add ( void )

virtual

Add parameters as options.

Reimplemented from HodgkinHuxley.

References HodgkinHuxley::add().

The documentation for this class was generated from the following files:

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation